Search Results
Event
Joint workshop featuring overviews of Roadmap Epigenomics and ENCODE resources that are freely available for use by the research community.
… practical experience with searching and downloading data from the ENCODE Portal, querying ENCODE data using the ENCODE Element Browser, exploring genome-scale chromatin interaction data using the 3D Genome Browser, and using the WashU … User's Guide to the Roadmap Epigenomics and ENCODE Data Resources …
Research Funding
A list of members who contribute to the goals of the IGVF Consortium by generating data and/or analyses, sharing data and/or analyses freely through the IGVF Data and Administrative Coordinating Center (DACC), and/or by contributing to cross- consortium integrative analyses.
… open-access resource that integrates genetic and genomic data, bioinformatic method results, and curated knowledge … visualizations we develop for the A2FKP to help interpret data produced by IGVF, and in turn integrate data produced by … will participate in the effort to build an analysis pipeline for the single-cell CRISPR screen data generated by …
Secondary Genomics Findings Service
Responsibilities as a PI, consent, type of data accepted, and how to apply
… samples are sent to SGFS. This includes ensuring that all data sent to the SGFS come from research participants who … Please do not send individual VCF files. Bioinformatics pipeline We strongly recommend the VCF file to be generated using the GATK best practices pipeline . Please ensure the VCF file has not undergone QC …
Secondary Genomics Findings Service
How to send data, confirming preliminary results, and returning results
… After the SGFS has received your data in the form of a .vcf file, we will commence annotation. … your acceptance to the SGFS, you will also receive an SGFS Data Submission Form with the top part completed. Prior to submitting a batch of data, please complete and initial the bottom part of this …
Talking Glossary
Methylation is a chemical modification of DNA and other molecules that may be retained as cells divide to make more cells. regulating the production of proteins that the gene encodes.
… where they turn a gene on or off, thereby regulating the production of proteins that the gene encodes. … as cells divide to make more cells. regulating the production of proteins that the gene encodes. …
News Release
NIH leaders are calling for the scientific community to develop a consensus on the appropriate use of race and ethnicity in biomedical research.
… NHGRI and NIMHD to discuss the use of race and ethnicity data in genomics, biomedical, and clinical research , and its … the scientific rigor in collecting racial and ethnic data, especially in clinical settings; standardize data-collection methodologies; develop new approaches to …
Staff
Helen Thompson was a Program Specialist for the NHGRI Office of Genomic Data Science.
… as a program specialist for the NHGRI Office of Genomic Data Science (OGDS) from 2023 to 2025. Helen provided … supporting communications efforts, and assisting in data science activities. She also served as the Executive Secretary for the NHGRI Genomic Data Science Working Group and other OGDS meetings involving …
Educational Resources
NHGRI offers infographics to tell stories related to genomics using data visualizations.
… infographics to tell stories related to genomics using data visualizations. These infographics provide an … infographics to tell stories related to genomics using data visualizations. … infographics to tell stories related to genomics using data visualizations. …
AnVIL
The Data Use Oversight System (DUOS) is a semi-automated study registration and DAR management service informed by the GA4GH DUO standard, which enables the secondary use of human genomics and other controlled-access data in compliance with the informed consent of a study’s participants.
… The National Institutes of Health (NIH) Data Access Committees (DACs) play an important role in … datasets (that contain potentially identifiable data and require approval prior to access) are used in a … NIH DACs while enabling efficient review and approval of data access requests (DARs).  The D ata U se O versight S …
Event
NHGRI will hold a third pre-application webinar about the Notice of Funding Opportunity (NOFO) RFA-HG-23-002, for potential applicants on May 3, 2024 at 2:30 pm ET.
… Broadening Opportunities for Computational Genomics and Data Science Education NOFO …